Resources

Under construction

This material is in an early draft stage.

Penn State

University Libraries

The Penn State University Libraries are a hub of information and training about many topics related to open science.

ScholarSphere

ScholarSphere is Penn State’s institutional repository for data and materials.

Data Commons

Data Commons is a Penn State-based data repository associated with Institutes of Energy and the Environment.

Penn State Policies

• Research Data Management
  • Formal announcement from June 30, 2025.

Penn State Open Scholarship Initiative

• GitHub organization.
• Open science survey protocol and results.
• R Markdown-formatted IRB application template documents.

Center for Social Data Analytics (SoDA)

Courses

• PSYCH 490: The reproducibility crisis in science
  • Spring 2023
  • Fall 2023
  • Fall 2024
• PSYCH 490: The psychology of data visualization

Outside PSU

• Center for Open Science (OSF)
• https://opensciency.github.io/sprint-content/
• Framework for Open and Reproducible Research Training: https://forrt.org
• https://nap.nationalacademies.org/catalog/25116/open-science-by-design-realizing-a-vision-for-21st-century
• CyVerse: https://foss.cyverse.org
• https://www.gida-global.org/care
• https://localcontexts.org
• Dr. Alondra Nelson’s memo about open access to federally-funded research and a commentary about it.
• Tyson Swetnam’s Awesome Open Science resources: https://tyson-swetnam.github.io/awesome-open-science/.

Posit PBC

Rick Gilmore has been binge-watching YouTube videos on the Posit PBC channel. Here are some he recommends:

• Huang, C. (2024, October 31). Quarto for Knowledge Management. YouTube. https://www.youtube.com/watch?v=4zy9R26B8kk
• Pileggi, Ss. (2024, October 31). Context is King. YouTube. https://www.youtube.com/watch?v=eoI9QZdHBMw&t=1067s
• Çetinkaya-Rundel, M. (2023, May 22). Quarto for Academics. YouTube. https://www.youtube.com/watch?v=EbAAmrB0luA&t=545s
• Çetinkaya-Rundel, M. (2023, December 15). Reproducible Manuscripts with Quarto - posit::conf(2023). YouTube. https://www.youtube.com/watch?v=BoiW9UWDLY0

Random resources

Embedding Google slides

Lynda Kellam asked about how to embed Google slides in a Quarto document.

Rick suggest three ways this could work.

You can ‘fake’ embedding Google slides in a Quarto document by showing a screenshot preview of your slides and adding a clickable link to the page inside the image caption:

Gilmore’s Google slides talk

Or, you can make the preview image clickable:

Finally, you can use the HTML iframe tag to embed a preview of a presentation: